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Image Processing Challenges in the Creation of Spatiotemporal Gene Expression Atlases of Developing Embryos
Citation
Castro González, Carlos and Luengo Oroz, Miguel Ángel and Douloquin, Louise and Thierry, Savy and Melani, Camilo and Desnoulez, Sophie and Bourgine, Paul and Peyrieras, Nadine and Ledesma Carbayo, María Jesús and Santos Lleo, Andres de (2011). Image Processing Challenges in the Creation of Spatiotemporal Gene Expression Atlases of Developing Embryos. In: "33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC 2011)", 30/08/2011 - 03/09/2011, Boston, MA, EEUU. ISBN 978-1-4244-4121-1. pp. 6841-6844. https://doi.org/10.1109/IEMBS.2011.6091687.
Description
| Title: | Image Processing Challenges in the Creation of Spatiotemporal Gene Expression Atlases of Developing Embryos |
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| Author/s: |
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| Item Type: | Presentation at Congress or Conference (Article) |
| Event Title: | 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC 2011) |
| Event Dates: | 30/08/2011 - 03/09/2011 |
| Event Location: | Boston, MA, EEUU |
| Title of Book: | Proceedings of 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC 2011) |
| Date: | 2011 |
| ISBN: | 978-1-4244-4121-1 |
| Subjects: | |
| Faculty: | E.T.S.I. Telecomunicación (UPM) |
| Department: | Ingeniería Electrónica |
| Creative Commons Licenses: | Recognition - No derivative works - Non commercial |
Abstract
To properly understand and model animal embryogenesis it is crucial to obtain detailed measurements, both in time and space, about their gene expression domains and cell dynamics. Such challenge has been confronted in recent years by a surge of atlases which integrate a statistically relevant number of different individuals to get robust, complete information about their spatiotemporal locations of gene patterns. This paper will discuss the fundamental image analysis strategies required to build such models and the most common problems found along the way. We also discuss the main challenges and future goals in the field.
More information
| Item ID: | 12046 |
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| DC Identifier: | https://oa.upm.es/12046/ |
| OAI Identifier: | oai:oa.upm.es:12046 |
| DOI: | 10.1109/IEMBS.2011.6091687 |
| Official URL: | http://ieeexplore.ieee.org/xpl/articleDetails.jsp?... |
| Deposited by: | Memoria Investigacion |
| Deposited on: | 17 Sep 2012 10:47 |
| Last Modified: | 21 Apr 2016 11:12 |
