A regularity index for dendrites - local statistics of a neuron's input space

Antón Sánchez, Laura, Effenberger, Félix, Bielza Lozoya, María Concepción ORCID: https://orcid.org/0000-0001-7109-2668, Larrañaga Múgica, Pedro María ORCID: https://orcid.org/0000-0002-1885-4501 and Cuntz, Hermann (2018). A regularity index for dendrites - local statistics of a neuron's input space. "PLOS Computational Biology", v. 14 (n. 11); pp. 1-22. ISSN 1553-7358. https://doi.org/10.1371/journal.pcbi.1006593.

Description

Title: A regularity index for dendrites - local statistics of a neuron's input space
Author/s:
Item Type: Article
Título de Revista/Publicación: PLOS Computational Biology
Date: 12 November 2018
ISSN: 1553-7358
Volume: 14
Subjects:
Faculty: E.T.S. de Ingenieros Informáticos (UPM)
Department: Inteligencia Artificial
Creative Commons Licenses: Recognition - No derivative works - Non commercial

Full text

[thumbnail of INVE_MEM_2018_293572.pdf]
Preview
PDF - Requires a PDF viewer, such as GSview, Xpdf or Adobe Acrobat Reader
Download (4MB) | Preview

Abstract

Neurons collect their inputs from other neurons by sending out arborized dendritic structures. However, the relationship between the shape of dendrites and the precise organization of synaptic inputs in the neural tissue remains unclear. Inputs could be distributed in tight clusters, entirely randomly or else in a regular grid-like manner. Here, we analyze dendritic branching structures using a regularity index R, based on average nearest neighbor distances between branch and termination points, characterizing their spatial distribution. We find that the distributions of these points depend strongly on cell types, indicating possible fundamental differences in synaptic input organization. Moreover, R is independent of cell size and we find that it is only weakly correlated with other branching statistics, suggesting that it might reflect features of dendritic morphology that are not captured by commonly studied branching statistics. We then use morphological models based on optimal wiring principles to study the relation between input distributions and dendritic branching structures. Using our models, we find that branch point distributions correlate more closely with the input distributions while termination points in dendrites are generally spread out more randomly with a close to uniform distribution. We validate these model predictions with connectome data. Finally, we find that in spatial input distributions with increasing regularity, characteristic scaling relationships between branching features are altered significantly. In summary, we conclude that local statistics of input distributions and dendrite morphology depend on each other leading to potentially cell type specific branching features.

Funding Projects

Type
Code
Acronym
Leader
Title
Government of Spain
C080020-09
Unspecified
Unspecified
Cajal Blue Brain
Government of Spain
TIN2016-79684-P
Unspecified
Universidad Politécnica de Madrid
Avances en clasificación multidimensional y detección de anomalías con redes bayesianas
Madrid Regional Government
S2013/ICE-2845
CASI – CAM
Unspecified
Conceptos y aplicaciones de los sistemas inteligentes
Horizon 2020
785907
HBP SGA2
Unspecified
Human Brain Project Specific Grant Agreement 2

More information

Item ID: 54568
DC Identifier: https://oa.upm.es/54568/
OAI Identifier: oai:oa.upm.es:54568
DOI: 10.1371/journal.pcbi.1006593
Official URL: https://journals.plos.org/ploscompbiol/article?id=...
Deposited by: Memoria Investigacion
Deposited on: 24 Apr 2019 08:54
Last Modified: 30 Nov 2022 09:00
  • Logo InvestigaM (UPM)
  • Logo GEOUP4
  • Logo Open Access
  • Open Access
  • Logo Sherpa/Romeo
    Check whether the anglo-saxon journal in which you have published an article allows you to also publish it under open access.
  • Logo Dulcinea
    Check whether the spanish journal in which you have published an article allows you to also publish it under open access.
  • Logo de Recolecta
  • Logo del Observatorio I+D+i UPM
  • Logo de OpenCourseWare UPM