Simulating multi-species behavior in fluid flow environment using CeCe simulator

Abstract

Drifting PACE [3] from theoretical basis to an in-vivo experiment comes complicated as broad range of input parameters are meant to be set appropriately. Reader should be aware of such difficulties when other efforts but within David Liu’s laboratory have resulted unsuccessful. Reasons above have drove us to try to implement PACE in-silico for the biologist to better chose the appropriate input set of parameters that would approach in-vivo experiment to success. However, some observations on its performance drove us to think over some improvements searching for several process optimizations. We have made use of CeCe, a promising open source simulator over which we have implemented several modules. Some of them are meant to simply simulate PACE while others are focused on incorporating complementary features which are intended to shed some light on more performing capabilities.